t_mesh Class Reference

#include <mesh.h>

Inheritance diagram for t_mesh:

Public Member Functions
void	InitMesh (bool lgUnitCell)
void	ValidateEdges () const
void	CheckMesh () const
bool	lgMeshSetUp () const
long	ncells () const
double	emm () const
double	egamry () const
double	getResolutionScaleFactor () const
void	setResolutionScaleFactor (double fac)
string	mesh_md5sum () const
const double *	anuptr () const
double	anu (size_t i) const
double	anu2 (size_t i) const
double	anu3 (size_t i) const
double	anuln (size_t i) const
const double *	anulog10ptr () const
double	anulog10 (size_t i) const
double	anusqrt (size_t i) const
double	anumin (size_t i) const
double	anumax (size_t i) const
double	widflx (size_t i) const
size_t	ipointC (double anu) const
size_t	ipointF (double anu) const
size_t	ithreshC (double threshold) const
size_t	ithreshF (double threshold) const
bool	isEnergyBound (Energy en) const
	t_mesh ()

Private Member Functions
void	p_ReadResolution ()
void	p_SetupMesh (bool lgUnitCell)
void	p_SetupEdges ()

Private Attributes
double	p_emm
double	p_egamry
double	p_ResolutionScaleFactor
string	p_mesh_md5sum
vector< double >	p_RangeUpperLimit
vector< double >	p_RangeResolution
vector< Energy >	p_edges
vector< double >	p_anu
vector< double >	p_anu_edge
vector< double >	p_widflx
vector< double >	p_anulog10
vector< double >	p_anuln
vector< double >	p_anusqrt
vector< double >	p_anu2
vector< double >	p_anu3

Constructor & Destructor Documentation

t_mesh::t_mesh ( )

inline

References p_egamry, p_emm, and p_ResolutionScaleFactor.

Member Function Documentation

double t_mesh::anu ( size_t  i ) const

inline

References p_anu.

Referenced by AGN_Hemis(), CalcTwoPhotonRates(), ContCreateMesh(), ContCreatePointers(), ContNegative(), ContRate(), ContSetIntensity(), ConvInitSolution(), CoolEvaluate(), EdenChange(), eeBremsSpectrum(), extin(), ffun1(), flxCell(), GammaBn(), GammaK(), GammaPrt(), GetDissociationRateCoeff(), diatomics::GetHeatRate(), GrainDrift(), GrainIonColl(), GrainMakeDiffuse(), GrainMakeDiffuseSingle(), GrainRateDr(), GrainsInit(), IncidentContinuumHere(), InitBinAugerData(), InterpolateGridCoStar(), InterpolateRectGrid(), ion_collis(), ion_trim(), ion_trim_init(), ipShells(), iso_collide(), iso_rad_rec_cooling_discrete(), IterRestart(), lgReadAtmosphereTail(), lincom(), lindst1(), lines_continuum(), mie_calc_ial(), mie_read_opc(), mie_write_opc(), mole_h_reactions(), OpacityAddTotal(), diatomics::OpacityCreate(), OpacityCreate1Element(), OpacityCreateAll(), OpacityCreatePowerLaw(), OpacityCreateReilMan(), outline_base(), outsum(), PE_init(), pintr(), PlanckIntegral(), plankf(), pnegopc(), PresTotCurrent(), PrettyTransmission(), PrtComment(), PrtFinal(), PrtHeader(), punchFITS_GenericData(), qheat(), qheat_init(), qintr(), ReadTable(), RebinAtmosphere(), RebinSingleCell(), RT_continuum(), RT_DestProb(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_one_tauinc(), RT_OTS_ChkSum(), RT_OTS_PrtRate(), RT_recom_effic(), RT_tau_init(), SanityCheckBegin(), save_opacity(), SaveDo(), saveFITSfile(), SaveSpecial(), t_rfield::setTrimming(), sum_radiation(), sumcon(), tauff(), tfidle(), TwoPhotonSetup(), UpdatePot(), y0b(), and y0b01().

double t_mesh::anu2 ( size_t  i ) const

inline

References p_anu2.

Referenced by AGN_Hemis(), cdSPEC2(), ContCreatePointers(), ContSetIntensity(), eeBremsSpectrum(), flxCell(), GrainMakeDiffuse(), highen(), iso_rad_rec_cooling_discrete(), lines_continuum(), qheat(), RT_diffuse(), RT_iso_integrate_RRC(), SaveDo(), SaveSpecial(), and sumcon().

double t_mesh::anu3 ( size_t  i ) const

inline

References p_anu3.

Referenced by PlanckIntegral().

double t_mesh::anuln ( size_t  i ) const

inline

References p_anuln.

Referenced by eeBremsSpectrum().

double t_mesh::anulog10 ( size_t  i ) const

inline

References p_anulog10.

const double* t_mesh::anulog10ptr ( ) const

inline

References get_ptr(), and p_anulog10.

Referenced by t_gaunt::brems_opac(), and t_gaunt::p_setup_brems().

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double t_mesh::anumax ( size_t  i ) const

inline

References p_anu_edge.

Referenced by CheckMesh(), ContBandsCreate(), ContSetIntensity(), EdenChange(), ffun1(), FindStrongestLineLabels(), GammaBn(), iso_rad_rec_cooling_discrete(), OpacityCreateAll(), PrtHeader(), punchFITS_EnergyData(), qheat_init(), RebinAtmosphere(), RebinSingleCell(), RT_iso_integrate_RRC(), TryDoubleStep(), and TwoPhotonSetup().

double t_mesh::anumin ( size_t  i ) const

inline

References p_anu_edge.

Referenced by CheckMesh(), ContBandsCreate(), ContSetIntensity(), EdenChange(), FindStrongestLineLabels(), GammaBn(), iso_rad_rec_cooling_discrete(), OpacityCreateAll(), PrtHeader(), punchFITS_EnergyData(), RebinAtmosphere(), RebinSingleCell(), RT_iso_integrate_RRC(), tfidle(), and TryDoubleStep().

const double* t_mesh::anuptr ( ) const

inline

References get_ptr(), and p_anu.

Referenced by GammaK(), GrainCharge(), GrainTemperature(), lgReadAtmosphereTail(), mie_calc_ial(), mie_write_opc(), and UpdatePot1().

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double t_mesh::anusqrt ( size_t  i ) const

inline

References p_anusqrt.

Referenced by OpacityCreateAll().

void t_mesh::CheckMesh

(

)

const

References anumax(), anumin(), ASSERT, cdEXIT, DEBUG_ENTRY, egamry(), emm(), energy(), EXIT_FAILURE, fp_equal(), fprintf(), ioQQQ, ipointC(), ncells(), p_anu, and p_RangeUpperLimit.

Referenced by SanityCheckBegin().

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double t_mesh::egamry ( ) const

inline

References p_egamry.

Referenced by t_PredCont::add(), CheckMesh(), ffun1(), GrainsInit(), InitDefaultsPreparse(), ipoint(), isEnergyBound(), mie_read_opc(), mie_write_opc(), outline_base(), EnergyEntry::p_set_ip(), ParseAbsMag(), ParseBackgrd(), ParseBlackbody(), ParseCMB(), ParseEnergy(), ParseInterp(), ParseLuminosity(), ParseRangeOption(), ParseRatio(), ParseSet(), ParseStop(), ParseTable(), PrtHeader(), ReadTable(), and SaveDo().

double t_mesh::emm ( ) const

inline

References p_emm.

Referenced by t_PredCont::add(), CheckMesh(), ContCreatePointers(), ffun1(), GrainsInit(), HyperfineCreate(), ipoint(), isEnergyBound(), mie_read_opc(), mie_write_opc(), outline_base(), EnergyEntry::p_set_ip(), ParseAbsMag(), ParseBackgrd(), ParseBlackbody(), ParseCMB(), ParseDatabaseISO(), ParseEnergy(), ParseInterp(), ParseLuminosity(), ParseRangeOption(), ParseRatio(), ParseSet(), ParseStop(), ParseTable(), qheat_init(), ReadTable(), resetBltin(), rfield_opac_alloc(), and SaveDo().

double t_mesh::getResolutionScaleFactor ( ) const

inline

References p_ResolutionScaleFactor.

Referenced by conorm(), mie_write_opc(), and SaveDo().

void t_mesh::InitMesh ( bool  lgUnitCell )

inline

References lgMeshSetUp(), MD5datafile(), p_egamry, p_emm, p_mesh_md5sum, p_ReadResolution(), p_SetupEdges(), p_SetupMesh(), and Energy::Ryd().

Referenced by cdDrive().

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size_t t_mesh::ipointC ( double  anu ) const

inline

References ASSERT, hunt_bisect(), lgMeshSetUp(), and p_anu_edge.

Referenced by CheckMesh(), ffun1(), GrainCharge(), ipointF(), ParseTable(), pintr(), qheat_init(), qintr(), and saveFITSfile().

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size_t t_mesh::ipointF ( double  anu ) const

inline

References ipointC().

Referenced by ipoint().

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bool t_mesh::isEnergyBound ( Energy  en ) const

inline

References egamry(), emm(), and Energy::Ryd().

Referenced by atmdat_CHIANTI_readin(), atmdat_LAMDA_readin(), atmdat_STOUT_readin(), ContCreatePointers(), and iso_create().

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size_t t_mesh::ithreshC ( double  threshold ) const

inline

References ASSERT, hunt_bisect(), lgMeshSetUp(), and p_anu.

Referenced by eeBremsSpectrum(), GrainsInit(), ithreshF(), UpdatePot1(), and y0b().

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size_t t_mesh::ithreshF ( double  threshold ) const

inline

References ithreshC().

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bool t_mesh::lgMeshSetUp ( ) const

inline

References p_anu.

Referenced by ContCreateMesh(), InitMesh(), ipointC(), ithreshC(), ParseCompile(), setResolutionScaleFactor(), and tfidle().

string t_mesh::mesh_md5sum ( ) const

inline

References p_mesh_md5sum.

Referenced by mie_read_opc(), mie_write_opc(), ReadTable(), and SaveDo().

long t_mesh::ncells ( ) const

inline

References p_anu.

Referenced by cdDrive(), CheckMesh(), and ContCreateMesh().

void t_mesh::p_ReadResolution ( )

private

References ASSERT, cdEXIT, DEBUG_ENTRY, EXIT_FAILURE, FFmtRead(), fp_equal(), fp_equal_tol(), fprintf(), ioQQQ, t_trace::lgTrace, open_data(), p_edges, p_egamry, p_RangeResolution, p_RangeUpperLimit, p_ResolutionScaleFactor, read_whole_line(), and trace.

Referenced by InitMesh().

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void t_mesh::p_SetupEdges ( )

private

References DEBUG_ENTRY, and p_edges.

Referenced by InitMesh().

void t_mesh::p_SetupMesh ( bool  lgUnitCell )

private

References ASSERT, DEBUG_ENTRY, fprintf(), ioQQQ, t_trace::lgTrace, p_anu, p_anu2, p_anu3, p_anu_edge, p_anuln, p_anulog10, p_anusqrt, p_emm, p_RangeResolution, p_RangeUpperLimit, p_ResolutionScaleFactor, p_widflx, pow2(), pow3(), and trace.

Referenced by InitMesh().

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void t_mesh::setResolutionScaleFactor ( double  fac )

inline

References ASSERT, fp_equal(), lgMeshSetUp(), and p_ResolutionScaleFactor.

Referenced by cdRead().

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void t_mesh::ValidateEdges

(

)

const

References cdEXIT, DEBUG_ENTRY, dense, EXIT_FAILURE, fprintf(), ioQQQ, ipH1s, ipH2p, ipH2s, ipH_LIKE, ipHe1s1S, ipHE_LIKE, ipHELIUM, ipHYDROGEN, iso_sp, t_dense::lgElmtOn, t_opac::o3exc, t_opac::o3exc3, opac, and p_edges.

Referenced by SanityCheckBegin().

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double t_mesh::widflx ( size_t  i ) const

inline

References p_widflx.

Referenced by AGN_Hemis(), cdSPEC2(), ContBandsCreate(), ContCreatePointers(), ContRate(), ContSetIntensity(), eeBremsSpectrum(), flxCell(), GammaBn(), GrainMakeDiffuse(), GrainRateDr(), IncidentContinuumHere(), iso_rad_rec_cooling_discrete(), lincom(), lines_continuum(), t_gaunt::p_setup_brems(), pintr(), PlanckIntegral(), PrettyTransmission(), PrtFinal(), PrtHeader(), PrtTwoPhotonEmissCoef(), punchFITS_SpectraData(), qheat(), qheat_init(), qintr(), RT_diffuse(), RT_iso_integrate_RRC(), SaveDo(), SaveSpecial(), t_rfield::setTrimming(), tauff(), tfidle(), and TwoPhotonSetup().

Member Data Documentation

vector<double> t_mesh::p_anu

private

energy in Ryd of center of cell

Referenced by anu(), anuptr(), CheckMesh(), ithreshC(), lgMeshSetUp(), ncells(), and p_SetupMesh().

vector<double> t_mesh::p_anu2

private

Referenced by anu2(), and p_SetupMesh().

vector<double> t_mesh::p_anu3

private

Referenced by anu3(), and p_SetupMesh().

vector<double> t_mesh::p_anu_edge

private

energy in Ryd at the edges of each cell

Referenced by anumax(), anumin(), ipointC(), and p_SetupMesh().

vector<double> t_mesh::p_anuln

private

Referenced by anuln(), and p_SetupMesh().

vector<double> t_mesh::p_anulog10

private

these are log, sqrt, square, and cube of anu array

Referenced by anulog10(), anulog10ptr(), and p_SetupMesh().

vector<double> t_mesh::p_anusqrt

private

Referenced by anusqrt(), and p_SetupMesh().

vector<Energy> t_mesh::p_edges

private

a list of major ionization edges that need to be fiddled into the frequency mesh

Referenced by p_ReadResolution(), p_SetupEdges(), and ValidateEdges().

double t_mesh::p_egamry

private

the energy of the upper limit high-energy limit of the continuum

Referenced by egamry(), InitMesh(), p_ReadResolution(), and t_mesh().

double t_mesh::p_emm

private

================================================================================= the following define the continuum energy scale and its limits the energy of the lower limit low-energy limit of the continuum

Referenced by emm(), InitMesh(), p_SetupMesh(), and t_mesh().

string t_mesh::p_mesh_md5sum

private

MD5 sum of the continuum_mesh.ini file

Referenced by InitMesh(), and mesh_md5sum().

vector<double> t_mesh::p_RangeResolution

private

Referenced by p_ReadResolution(), and p_SetupMesh().

vector<double> t_mesh::p_RangeUpperLimit

private

this is information needed to set the energy binning, full continuum is described by series of ranges where resolution is constant over that range

Referenced by CheckMesh(), p_ReadResolution(), and p_SetupMesh().

double t_mesh::p_ResolutionScaleFactor

private

factor to reset continuum resolution from continuum_mesh.ini, default is unity, reset with set continuum resolution command

Referenced by getResolutionScaleFactor(), p_ReadResolution(), p_SetupMesh(), setResolutionScaleFactor(), and t_mesh().

vector<double> t_mesh::p_widflx

private

width of cells in Rydberg

Referenced by p_SetupMesh(), and widflx().

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The documentation for this class was generated from the following files:

• mesh.h
• mesh.cpp